3.
Molecular Modelling Analyses of Metabolism of Zoledronic Acid,
Pamidronate and Clodronate
Fazlul Huq
Discipline of Biomedical Science, School of Medical Sciences,
Faculty of Medicine, Cumberland Campus, C42, The University of
Sydney,Lidcombe,
NSW, Australia.
Phone: +61 2 9351 9522; Fax: +61 2 9351 9520 Email:
F.Huq@usyd.edu.au
Abstract
Zoledronic acid (ZA) is a third-generation
heterocyclic nitrogen-containing bisphosphonate approved in the
EU for the treatment of Paget’s disease of bone. Like other
nitrogen-containing bisphosphonates such as pamidronic acid
(PMD). ZA is a more potent inhibitor of bone resorption than
bisphosphonates that do not contain nitrogen e.g. etidronic
acid, clodronic acid (CLD) and tiludronic acid. In this study,
molecular modelling analyses based on molecular mechanics,
semi-empirical (PM3) and DFT (at B3LYP/6-31G* level)
calculations have been carried out to obtain information on
relative toxicity of ZA, CLD and PMD. The results of the
analyses show that ZA, CLD and PMD have LUMO-HOMO energy
differences of the order of 6.1 to 7.0 eV so that the compounds
would all be inert kinetically. The molecular surfaces of ZA,
CLD and PMD are found to abound in neutral green and
electron-rich red and yellow regions so that they can be subject
to lyophilic and electrophilic attacks. Paucity of
electron-deficient regions on the molecular surfaces of the
compounds indicate that the compounds may not induce cellular
toxicity associated with glutathione depletion and DNA damage
associated with oxidation of nucleobases in DNA.
Key words:
Zoledronic acid, osteoporosis, Paget’s disease, molecular
modelling
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